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It probably won't hurt ,but I would wait. I find that triping when your healthy and bug free to be best. Let her immune system and antibiotics get rid of her infection and then enjoy your trip. This is just my opinion and you can do what you want.
Best of luck!
-------------------- Some rise
To get to Terrapin!!!
That'd be something to ask her doctor, but if you're uncomfortable with that, I'd suggest against it. Chinacat is right, and you also don't want her to start thinking her kidney is acting funny while she's tripping, that could cause a lot of anxiety and ruin her trip I think.